His jab was televised on Sunday in order to help boost confidence in the vaccine rollout across Australia.
Vaccinations officially begin on Monday and at least 60,000 doses are expected to be administered next week.
On Saturday, small crowds of anti-vaccination demonstrators gathered to protest against the launch.
Mr Morrison was part of a small group of people vaccinated on Sunday along with some frontline health workers and care home residents. Australia's chief nurse Professor Alison McMillan and Chief Medical Officer Professor Paul Kelly were also immunised.